Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.22■□□□□ 0.35
PrnpP04925 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.22■□□□□ 0.35
PrnpP04925 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PrnpP04925 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.22■□□□□ 0.35
PrnpP04925 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.22■□□□□ 0.35
PrnpP04925 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.22■□□□□ 0.35
PrnpP04925 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PrnpP04925 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PrnpP04925 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PrnpP04925 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.21■□□□□ 0.35
PrnpP04925 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.21■□□□□ 0.35
PrnpP04925 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PrnpP04925 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Gm25745-201ENSMUST00000174945 133 ntBASIC17.21■□□□□ 0.35
PrnpP04925 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.21■□□□□ 0.35
PrnpP04925 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.21■□□□□ 0.35
PrnpP04925 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.21■□□□□ 0.35
PrnpP04925 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.21■□□□□ 0.35
PrnpP04925 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.21■□□□□ 0.35
PrnpP04925 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.21■□□□□ 0.35
PrnpP04925 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PrnpP04925 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PrnpP04925 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrnpP04925 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PrnpP04925 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.2■□□□□ 0.34
PrnpP04925 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PrnpP04925 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PrnpP04925 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PrnpP04925 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PrnpP04925 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrnpP04925 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.2■□□□□ 0.34
PrnpP04925 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PrnpP04925 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PrnpP04925 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.19■□□□□ 0.34
PrnpP04925 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.19■□□□□ 0.34
PrnpP04925 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PrnpP04925 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.19■□□□□ 0.34
PrnpP04925 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.19■□□□□ 0.34
PrnpP04925 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PrnpP04925 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PrnpP04925 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrnpP04925 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PrnpP04925 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.18■□□□□ 0.34
PrnpP04925 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.18■□□□□ 0.34
PrnpP04925 Gm37935-201ENSMUST00000192012 982 ntBASIC17.18■□□□□ 0.34
PrnpP04925 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.18■□□□□ 0.34
PrnpP04925 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrnpP04925 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms