Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IghmP01872 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IghmP01872 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
IghmP01872 Actl10-202ENSMUST00000226583 1501 ntBASIC15.58■□□□□ 0.09
IghmP01872 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IghmP01872 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IghmP01872 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IghmP01872 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
IghmP01872 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
IghmP01872 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.58■□□□□ 0.08
IghmP01872 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IghmP01872 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
IghmP01872 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.58■□□□□ 0.08
IghmP01872 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.57■□□□□ 0.08
IghmP01872 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 Gm22240-201ENSMUST00000175225 82 ntBASIC15.57■□□□□ 0.08
IghmP01872 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.57■□□□□ 0.08
IghmP01872 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.57■□□□□ 0.08
IghmP01872 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.57■□□□□ 0.08
IghmP01872 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.57■□□□□ 0.08
IghmP01872 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Gm10812-201ENSMUST00000099864 546 ntBASIC15.57■□□□□ 0.08
IghmP01872 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.57■□□□□ 0.08
IghmP01872 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IghmP01872 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.56■□□□□ 0.08
IghmP01872 Phf7-203ENSMUST00000226565 1971 ntBASIC15.56■□□□□ 0.08
IghmP01872 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.56■□□□□ 0.08
IghmP01872 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IghmP01872 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.56■□□□□ 0.08
IghmP01872 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.56■□□□□ 0.08
IghmP01872 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.56■□□□□ 0.08
IghmP01872 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.56■□□□□ 0.08
IghmP01872 Gm7370-201ENSMUST00000219471 767 ntBASIC15.56■□□□□ 0.08
IghmP01872 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IghmP01872 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IghmP01872 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.55■□□□□ 0.08
IghmP01872 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.55■□□□□ 0.08
IghmP01872 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IghmP01872 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IghmP01872 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
IghmP01872 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.55■□□□□ 0.08
IghmP01872 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Gm27011-201ENSMUST00000182352 972 ntBASIC15.55■□□□□ 0.08
IghmP01872 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.55■□□□□ 0.08
IghmP01872 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.55■□□□□ 0.08
IghmP01872 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IghmP01872 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms