Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.79■□□□□ 0.28
Sp1O89090 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp1O89090 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.79■□□□□ 0.28
Sp1O89090 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp1O89090 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.78■□□□□ 0.28
Sp1O89090 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sp1O89090 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sp1O89090 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp1O89090 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp1O89090 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.77■□□□□ 0.28
Sp1O89090 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.77■□□□□ 0.28
Sp1O89090 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp1O89090 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Sp1O89090 Gm27741-201ENSMUST00000185060 237 ntBASIC16.77■□□□□ 0.28
Sp1O89090 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp1O89090 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp1O89090 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sp1O89090 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp1O89090 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.76■□□□□ 0.27
Sp1O89090 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Sp1O89090 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sp1O89090 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.76■□□□□ 0.27
Sp1O89090 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.76■□□□□ 0.27
Sp1O89090 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.76■□□□□ 0.27
Sp1O89090 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sp1O89090 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sp1O89090 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp1O89090 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sp1O89090 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.75■□□□□ 0.27
Sp1O89090 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.75■□□□□ 0.27
Sp1O89090 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Sp1O89090 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.75■□□□□ 0.27
Sp1O89090 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp1O89090 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.74■□□□□ 0.27
Sp1O89090 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.74■□□□□ 0.27
Sp1O89090 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.74■□□□□ 0.27
Sp1O89090 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp1O89090 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sp1O89090 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.74■□□□□ 0.27
Sp1O89090 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.73■□□□□ 0.27
Sp1O89090 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp1O89090 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp1O89090 Gm13312-201ENSMUST00000119631 718 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms