Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.09■□□□□ 0.33
Syn1O88935 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syn1O88935 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Syn1O88935 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Gm4535-201ENSMUST00000182274 558 ntBASIC17.09■□□□□ 0.33
Syn1O88935 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.09■□□□□ 0.33
Syn1O88935 Gm27000-201ENSMUST00000182943 842 ntBASIC17.09■□□□□ 0.33
Syn1O88935 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.09■□□□□ 0.33
Syn1O88935 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.09■□□□□ 0.33
Syn1O88935 Gm10355-201ENSMUST00000097146 517 ntBASIC17.09■□□□□ 0.33
Syn1O88935 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syn1O88935 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syn1O88935 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Syn1O88935 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Syn1O88935 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Syn1O88935 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Syn1O88935 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.08■□□□□ 0.33
Syn1O88935 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Syn1O88935 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Syn1O88935 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.08■□□□□ 0.32
Syn1O88935 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.08■□□□□ 0.32
Syn1O88935 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.08■□□□□ 0.32
Syn1O88935 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syn1O88935 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Syn1O88935 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Gm43438-201ENSMUST00000198133 379 ntBASIC17.07■□□□□ 0.32
Syn1O88935 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.07■□□□□ 0.32
Syn1O88935 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.07■□□□□ 0.32
Syn1O88935 AV026068-213ENSMUST00000223675 1171 ntBASIC17.07■□□□□ 0.32
Syn1O88935 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Syn1O88935 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.07■□□□□ 0.32
Syn1O88935 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syn1O88935 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.06■□□□□ 0.32
Syn1O88935 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Syn1O88935 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.06■□□□□ 0.32
Syn1O88935 Gm27628-201ENSMUST00000184911 107 ntBASIC17.06■□□□□ 0.32
Syn1O88935 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syn1O88935 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Syn1O88935 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syn1O88935 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.05■□□□□ 0.32
Syn1O88935 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Syn1O88935 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Syn1O88935 Gm25745-201ENSMUST00000174945 133 ntBASIC17.05■□□□□ 0.32
Syn1O88935 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.05■□□□□ 0.32
Syn1O88935 Gm29707-201ENSMUST00000196325 491 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms