Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.24□□□□□ -0.13
Cldn1O88551 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn1O88551 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn1O88551 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn1O88551 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn1O88551 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn1O88551 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn1O88551 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.24□□□□□ -0.13
Cldn1O88551 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn1O88551 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cldn1O88551 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn1O88551 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn1O88551 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn1O88551 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Gm2651-201ENSMUST00000203560 838 ntBASIC14.23□□□□□ -0.13
Cldn1O88551 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn1O88551 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cldn1O88551 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn1O88551 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.22□□□□□ -0.13
Cldn1O88551 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cldn1O88551 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn1O88551 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cldn1O88551 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn1O88551 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cldn1O88551 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.21□□□□□ -0.13
Cldn1O88551 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cldn1O88551 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.21□□□□□ -0.13
Cldn1O88551 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.21□□□□□ -0.13
Cldn1O88551 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.21□□□□□ -0.13
Cldn1O88551 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cldn1O88551 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cldn1O88551 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.21□□□□□ -0.13
Cldn1O88551 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn1O88551 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms