Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Gm9103-201ENSMUST00000119371 405 ntBASIC20.71■□□□□ 0.91
Cfdp1O88271 Olfr129-201ENSMUST00000122318 993 ntBASIC20.71■□□□□ 0.91
Cfdp1O88271 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.71■□□□□ 0.91
Cfdp1O88271 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfdp1O88271 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.7■□□□□ 0.9
Cfdp1O88271 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cfdp1O88271 Gm15794-201ENSMUST00000120182 631 ntBASIC20.7■□□□□ 0.9
Cfdp1O88271 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.7■□□□□ 0.9
Cfdp1O88271 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.7■□□□□ 0.9
Cfdp1O88271 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Cfdp1O88271 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfdp1O88271 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cfdp1O88271 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.69■□□□□ 0.9
Cfdp1O88271 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Gm17807-201ENSMUST00000186869 298 ntBASIC20.69■□□□□ 0.9
Cfdp1O88271 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.69■□□□□ 0.9
Cfdp1O88271 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cfdp1O88271 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cfdp1O88271 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.68■□□□□ 0.9
Cfdp1O88271 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.68■□□□□ 0.9
Cfdp1O88271 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.68■□□□□ 0.9
Cfdp1O88271 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Cfdp1O88271 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cfdp1O88271 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cfdp1O88271 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.67■□□□□ 0.9
Cfdp1O88271 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.67■□□□□ 0.9
Cfdp1O88271 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cfdp1O88271 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfdp1O88271 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cfdp1O88271 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfdp1O88271 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfdp1O88271 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms