Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.2■□□□□ 0.18
Tspan6O70401 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.2■□□□□ 0.18
Tspan6O70401 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tspan6O70401 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.19■□□□□ 0.18
Tspan6O70401 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.19■□□□□ 0.18
Tspan6O70401 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.19■□□□□ 0.18
Tspan6O70401 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Tspan6O70401 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tspan6O70401 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tspan6O70401 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tspan6O70401 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tspan6O70401 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Gm13884-201ENSMUST00000118103 829 ntBASIC16.18■□□□□ 0.18
Tspan6O70401 Gm12644-201ENSMUST00000119935 606 ntBASIC16.18■□□□□ 0.18
Tspan6O70401 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.18■□□□□ 0.18
Tspan6O70401 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.18■□□□□ 0.18
Tspan6O70401 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.18■□□□□ 0.18
Tspan6O70401 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tspan6O70401 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.17■□□□□ 0.18
Tspan6O70401 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Tspan6O70401 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Tspan6O70401 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.17■□□□□ 0.18
Tspan6O70401 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tspan6O70401 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.16■□□□□ 0.18
Tspan6O70401 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Tspan6O70401 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tspan6O70401 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms