Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm7977-201ENSMUST00000193787 748 ntBASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pdlim1O70400 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdlim1O70400 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.4■□□□□ 0.22
Pdlim1O70400 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.4■□□□□ 0.22
Pdlim1O70400 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.4■□□□□ 0.22
Pdlim1O70400 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim1O70400 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pdlim1O70400 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.39■□□□□ 0.21
Pdlim1O70400 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Pdlim1O70400 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pdlim1O70400 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pdlim1O70400 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim1O70400 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pdlim1O70400 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.38■□□□□ 0.21
Pdlim1O70400 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.38■□□□□ 0.21
Pdlim1O70400 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.38■□□□□ 0.21
Pdlim1O70400 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim1O70400 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms