Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Mmp8O70138 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Mmp8O70138 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Mmp8O70138 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.28■□□□□ 0.84
Mmp8O70138 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Mmp8O70138 Gm29518-201ENSMUST00000190858 372 ntBASIC20.28■□□□□ 0.84
Mmp8O70138 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp8O70138 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Mmp8O70138 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Mmp8O70138 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Gm25016-201ENSMUST00000158399 131 ntBASIC20.27■□□□□ 0.84
Mmp8O70138 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.27■□□□□ 0.84
Mmp8O70138 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp8O70138 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Mmp8O70138 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mmp8O70138 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Mmp8O70138 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mmp8O70138 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Mmp8O70138 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Mmp8O70138 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Mmp8O70138 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Mmp8O70138 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Mmp8O70138 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Mmp8O70138 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp8O70138 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.25■□□□□ 0.83
Mmp8O70138 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mmp8O70138 Gm6623-201ENSMUST00000173570 544 ntBASIC20.25■□□□□ 0.83
Mmp8O70138 Gm17808-201ENSMUST00000200859 894 ntBASIC20.25■□□□□ 0.83
Mmp8O70138 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mmp8O70138 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mmp8O70138 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mmp8O70138 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.25■□□□□ 0.83
Mmp8O70138 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mmp8O70138 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Mmp8O70138 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp8O70138 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.24■□□□□ 0.83
Mmp8O70138 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.24■□□□□ 0.83
Mmp8O70138 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Mmp8O70138 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms