Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn5O54942 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn5O54942 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cldn5O54942 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Mir3081-201ENSMUST00000175305 84 ntBASIC17.26■□□□□ 0.35
Cldn5O54942 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cldn5O54942 Gm28033-201ENSMUST00000184224 96 ntBASIC17.26■□□□□ 0.35
Cldn5O54942 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Cldn5O54942 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn5O54942 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn5O54942 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn5O54942 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn5O54942 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cldn5O54942 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn5O54942 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn5O54942 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn5O54942 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn5O54942 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn5O54942 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn5O54942 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn5O54942 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn5O54942 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cldn5O54942 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.24■□□□□ 0.35
Cldn5O54942 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.24■□□□□ 0.35
Cldn5O54942 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn5O54942 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn5O54942 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cldn5O54942 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn5O54942 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.23■□□□□ 0.35
Cldn5O54942 Gm18669-201ENSMUST00000216049 778 ntBASIC17.23■□□□□ 0.35
Cldn5O54942 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Cldn5O54942 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.23■□□□□ 0.35
Cldn5O54942 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn5O54942 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn5O54942 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.22■□□□□ 0.35
Cldn5O54942 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldn5O54942 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn5O54942 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn5O54942 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Gm27357-201ENSMUST00000183754 135 ntBASIC17.22■□□□□ 0.35
Cldn5O54942 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cldn5O54942 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn5O54942 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn5O54942 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms