Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smarce1O54941 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.77■□□□□ 0.76
Smarce1O54941 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smarce1O54941 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smarce1O54941 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarce1O54941 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Smarce1O54941 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarce1O54941 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarce1O54941 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarce1O54941 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarce1O54941 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Smarce1O54941 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.76■□□□□ 0.75
Smarce1O54941 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarce1O54941 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Smarce1O54941 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Smarce1O54941 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Smarce1O54941 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarce1O54941 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smarce1O54941 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smarce1O54941 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Smarce1O54941 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.75■□□□□ 0.75
Smarce1O54941 Timm23-208ENSMUST00000226683 750 ntBASIC19.75■□□□□ 0.75
Smarce1O54941 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smarce1O54941 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Smarce1O54941 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.75■□□□□ 0.75
Smarce1O54941 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarce1O54941 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarce1O54941 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.74■□□□□ 0.75
Smarce1O54941 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarce1O54941 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.73■□□□□ 0.75
Smarce1O54941 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Gm20760-201ENSMUST00000179197 648 ntBASIC19.73■□□□□ 0.75
Smarce1O54941 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarce1O54941 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarce1O54941 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.72■□□□□ 0.75
Smarce1O54941 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.72■□□□□ 0.75
Smarce1O54941 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms