Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Gm36991-201ENSMUST00000191800 648 ntBASIC17.8■□□□□ 0.44
Clcn6O35454 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC17.8■□□□□ 0.44
Clcn6O35454 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.8■□□□□ 0.44
Clcn6O35454 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Gm11834-201ENSMUST00000122257 585 ntBASIC17.79■□□□□ 0.44
Clcn6O35454 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.79■□□□□ 0.44
Clcn6O35454 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Mtag2-201ENSMUST00000058665 714 ntBASIC17.79■□□□□ 0.44
Clcn6O35454 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn6O35454 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn6O35454 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn6O35454 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.79■□□□□ 0.44
Clcn6O35454 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.78■□□□□ 0.44
Clcn6O35454 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Gm42651-201ENSMUST00000199851 1339 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clcn6O35454 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clcn6O35454 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clcn6O35454 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.78■□□□□ 0.44
Clcn6O35454 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Gm22240-201ENSMUST00000175225 82 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clcn6O35454 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Gm8520-201ENSMUST00000186517 868 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Dio3-201ENSMUST00000097228 1449 ntBASIC17.78■□□□□ 0.44
Clcn6O35454 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn6O35454 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clcn6O35454 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clcn6O35454 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Clcn6O35454 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.77■□□□□ 0.44
Clcn6O35454 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Gm27275-201ENSMUST00000184318 272 ntBASIC17.77■□□□□ 0.44
Clcn6O35454 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Gm18026-201ENSMUST00000222789 727 ntBASIC17.77■□□□□ 0.44
Clcn6O35454 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clcn6O35454 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn6O35454 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn6O35454 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn6O35454 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn6O35454 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn6O35454 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn6O35454 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms