Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.81■□□□□ 0.76
Hdac1O09106 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.81■□□□□ 0.76
Hdac1O09106 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.8■□□□□ 0.76
Hdac1O09106 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hdac1O09106 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hdac1O09106 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac1O09106 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.79■□□□□ 0.76
Hdac1O09106 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.79■□□□□ 0.76
Hdac1O09106 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.79■□□□□ 0.76
Hdac1O09106 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac1O09106 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.79■□□□□ 0.76
Hdac1O09106 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hdac1O09106 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.78■□□□□ 0.76
Hdac1O09106 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.78■□□□□ 0.76
Hdac1O09106 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.78■□□□□ 0.76
Hdac1O09106 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.78■□□□□ 0.76
Hdac1O09106 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.78■□□□□ 0.76
Hdac1O09106 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac1O09106 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.77■□□□□ 0.76
Hdac1O09106 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hdac1O09106 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac1O09106 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Hdac1O09106 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hdac1O09106 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hdac1O09106 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hdac1O09106 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hdac1O09106 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.76■□□□□ 0.75
Hdac1O09106 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.76■□□□□ 0.75
Hdac1O09106 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Hdac1O09106 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac1O09106 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms