Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Gm11355-201ENSMUST00000121120 306 ntBASIC14.8□□□□□ -0.04
Sh2b3O09039 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.8□□□□□ -0.04
Sh2b3O09039 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Sh2b3O09039 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Gm29518-201ENSMUST00000190858 372 ntBASIC14.79□□□□□ -0.04
Sh2b3O09039 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2b3O09039 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Sh2b3O09039 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.78□□□□□ -0.04
Sh2b3O09039 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.78□□□□□ -0.04
Sh2b3O09039 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2b3O09039 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.77□□□□□ -0.04
Sh2b3O09039 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.77□□□□□ -0.04
Sh2b3O09039 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2b3O09039 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sh2b3O09039 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Sh2b3O09039 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sh2b3O09039 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sh2b3O09039 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.77□□□□□ -0.05
Sh2b3O09039 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sh2b3O09039 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2b3O09039 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms