Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ebf3O08791 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Gm15794-201ENSMUST00000120182 631 ntBASIC17.24■□□□□ 0.35
Ebf3O08791 Gm27000-201ENSMUST00000182943 842 ntBASIC17.24■□□□□ 0.35
Ebf3O08791 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ebf3O08791 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf3O08791 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ebf3O08791 Gm11336-201ENSMUST00000118168 334 ntBASIC17.23■□□□□ 0.35
Ebf3O08791 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ebf3O08791 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.23■□□□□ 0.35
Ebf3O08791 Gm34391-201ENSMUST00000203706 907 ntBASIC17.23■□□□□ 0.35
Ebf3O08791 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.23■□□□□ 0.35
Ebf3O08791 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ebf3O08791 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ebf3O08791 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.23■□□□□ 0.35
Ebf3O08791 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebf3O08791 Haglr-201ENSMUST00000100000 2085 ntBASIC17.22■□□□□ 0.35
Ebf3O08791 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ebf3O08791 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ebf3O08791 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.22■□□□□ 0.35
Ebf3O08791 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ebf3O08791 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.22■□□□□ 0.35
Ebf3O08791 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Ebf3O08791 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ebf3O08791 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebf3O08791 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ebf3O08791 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ebf3O08791 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.21■□□□□ 0.35
Ebf3O08791 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ebf3O08791 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.21■□□□□ 0.35
Ebf3O08791 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Ebf3O08791 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Ebf3O08791 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Ebf3O08791 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebf3O08791 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ebf3O08791 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ebf3O08791 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ebf3O08791 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ebf3O08791 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Ebf3O08791 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Ebf3O08791 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.2■□□□□ 0.34
Ebf3O08791 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.2■□□□□ 0.34
Ebf3O08791 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.2■□□□□ 0.34
Ebf3O08791 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ebf3O08791 Mzt1-203ENSMUST00000227948 952 ntBASIC17.2■□□□□ 0.34
Ebf3O08791 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.2■□□□□ 0.34
Ebf3O08791 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ebf3O08791 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebf3O08791 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.19■□□□□ 0.34
Ebf3O08791 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.19■□□□□ 0.34
Ebf3O08791 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms