Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.45■□□□□ 0.7
Tcof1O08784 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Tcof1O08784 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.45■□□□□ 0.7
Tcof1O08784 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.45■□□□□ 0.7
Tcof1O08784 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tcof1O08784 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tcof1O08784 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tcof1O08784 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tcof1O08784 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.44■□□□□ 0.7
Tcof1O08784 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.44■□□□□ 0.7
Tcof1O08784 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.44■□□□□ 0.7
Tcof1O08784 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tcof1O08784 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.43■□□□□ 0.7
Tcof1O08784 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.43■□□□□ 0.7
Tcof1O08784 Gm29707-201ENSMUST00000196325 491 ntBASIC19.43■□□□□ 0.7
Tcof1O08784 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tcof1O08784 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcof1O08784 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tcof1O08784 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Tcof1O08784 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.42■□□□□ 0.7
Tcof1O08784 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Tcof1O08784 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tcof1O08784 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.42■□□□□ 0.7
Tcof1O08784 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.42■□□□□ 0.7
Tcof1O08784 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcof1O08784 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tcof1O08784 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Tcof1O08784 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.41■□□□□ 0.7
Tcof1O08784 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcof1O08784 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.4■□□□□ 0.7
Tcof1O08784 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tcof1O08784 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tcof1O08784 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.4■□□□□ 0.7
Tcof1O08784 Gm15794-201ENSMUST00000120182 631 ntBASIC19.4■□□□□ 0.7
Tcof1O08784 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.4■□□□□ 0.7
Tcof1O08784 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tcof1O08784 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
Tcof1O08784 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcof1O08784 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Tcof1O08784 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tcof1O08784 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Tcof1O08784 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms