Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp35M0QWN7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp35M0QWN7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.84■□□□□ 0.45
Usp35M0QWN7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp35M0QWN7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.83■□□□□ 0.45
Usp35M0QWN7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.83■□□□□ 0.44
Usp35M0QWN7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.83■□□□□ 0.44
Usp35M0QWN7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.83■□□□□ 0.44
Usp35M0QWN7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp35M0QWN7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.82■□□□□ 0.44
Usp35M0QWN7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.82■□□□□ 0.44
Usp35M0QWN7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp35M0QWN7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.81■□□□□ 0.44
Usp35M0QWN7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.81■□□□□ 0.44
Usp35M0QWN7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp35M0QWN7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.8■□□□□ 0.44
Usp35M0QWN7 Gm17808-201ENSMUST00000200859 894 ntBASIC17.8■□□□□ 0.44
Usp35M0QWN7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp35M0QWN7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp35M0QWN7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Usp35M0QWN7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp35M0QWN7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Usp35M0QWN7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp35M0QWN7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms