Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Trav13d-3J3QMG8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Mir1668-201ENSMUST00000184114 107 ntBASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Gm18115-201ENSMUST00000221209 621 ntBASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-3J3QMG8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-3J3QMG8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms