Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
9930021J03RikH3BKP8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
9930021J03RikH3BKP8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
9930021J03RikH3BKP8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.51■□□□□ 0.07
9930021J03RikH3BKP8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Gm33142-201ENSMUST00000193913 867 ntBASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.5■□□□□ 0.07
9930021J03RikH3BKP8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
9930021J03RikH3BKP8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
9930021J03RikH3BKP8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms