Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.16■□□□□ 0.34
Trim55G3X8Y1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim55G3X8Y1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim55G3X8Y1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim55G3X8Y1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim55G3X8Y1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.12■□□□□ 0.33
Trim55G3X8Y1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim55G3X8Y1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms