Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Gm14057-201ENSMUST00000120631 482 ntBASIC19.98■□□□□ 0.79
NpcdF8VQB8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NpcdF8VQB8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.97■□□□□ 0.79
NpcdF8VQB8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.97■□□□□ 0.79
NpcdF8VQB8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NpcdF8VQB8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NpcdF8VQB8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.96■□□□□ 0.79
NpcdF8VQB8 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.96■□□□□ 0.79
NpcdF8VQB8 Gm44450-201ENSMUST00000199528 114 ntBASIC19.96■□□□□ 0.79
NpcdF8VQB8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NpcdF8VQB8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.95■□□□□ 0.78
NpcdF8VQB8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.95■□□□□ 0.78
NpcdF8VQB8 Gm15590-201ENSMUST00000078419 552 ntBASIC19.95■□□□□ 0.78
NpcdF8VQB8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NpcdF8VQB8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.94■□□□□ 0.78
NpcdF8VQB8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Gm4535-201ENSMUST00000182274 558 ntBASIC19.94■□□□□ 0.78
NpcdF8VQB8 AV026068-213ENSMUST00000223675 1171 ntBASIC19.94■□□□□ 0.78
NpcdF8VQB8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Gm10355-201ENSMUST00000097146 517 ntBASIC19.94■□□□□ 0.78
NpcdF8VQB8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.94■□□□□ 0.78
NpcdF8VQB8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.94■□□□□ 0.78
NpcdF8VQB8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Fst-202ENSMUST00000223640 2612 ntBASIC19.93■□□□□ 0.78
NpcdF8VQB8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Gm6089-201ENSMUST00000197666 938 ntBASIC19.93■□□□□ 0.78
NpcdF8VQB8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms