Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh11xF6ZNL5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh11xF6ZNL5 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.39■□□□□ 0.54
Pcdh11xF6ZNL5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh11xF6ZNL5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh11xF6ZNL5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Gm44450-201ENSMUST00000199528 114 ntBASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Gm18032-201ENSMUST00000222541 538 ntBASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh11xF6ZNL5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh11xF6ZNL5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh11xF6ZNL5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh11xF6ZNL5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms