Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm13186-201ENSMUST00000118031 316 ntBASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Gm11336-201ENSMUST00000118168 334 ntBASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Gm8969-201ENSMUST00000199694 526 ntBASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdh17E9PXF0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh17E9PXF0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh17E9PXF0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh17E9PXF0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh17E9PXF0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Olfr129-201ENSMUST00000122318 993 ntBASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh17E9PXF0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh17E9PXF0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms