Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC048679D3YXE9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC048679D3YXE9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.02□□□□□ -0.17
BC048679D3YXE9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.02□□□□□ -0.17
BC048679D3YXE9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.02□□□□□ -0.17
BC048679D3YXE9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC048679D3YXE9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Dio3-201ENSMUST00000097228 1449 ntBASIC14.01□□□□□ -0.17
BC048679D3YXE9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Gm37179-201ENSMUST00000194862 823 ntBASIC14.01□□□□□ -0.17
BC048679D3YXE9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC048679D3YXE9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
BC048679D3YXE9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BC048679D3YXE9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BC048679D3YXE9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Gm11249-201ENSMUST00000117071 859 ntBASIC14□□□□□ -0.17
BC048679D3YXE9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14□□□□□ -0.17
BC048679D3YXE9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14□□□□□ -0.17
BC048679D3YXE9 Gm3807-201ENSMUST00000193520 1168 ntBASIC14□□□□□ -0.17
BC048679D3YXE9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14□□□□□ -0.17
BC048679D3YXE9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14□□□□□ -0.17
BC048679D3YXE9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BC048679D3YXE9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BC048679D3YXE9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms