Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gm22240-201ENSMUST00000175225 82 ntBASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2aeC0HKE4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hist1h2aeC0HKE4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h2aeC0HKE4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h2aeC0HKE4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Hist1h2aeC0HKE4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h2aeC0HKE4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h2aeC0HKE4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h2aeC0HKE4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h2aeC0HKE4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms