Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Gm11594-201ENSMUST00000122313 162 ntBASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn7aB1AYL1 Gm8000-201ENSMUST00000188378 592 ntBASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.41■■□□□ 1.02
Scn7aB1AYL1 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.41■■□□□ 1.02
Scn7aB1AYL1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.41■■□□□ 1.02
Scn7aB1AYL1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Gm13216-201ENSMUST00000117145 591 ntBASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn7aB1AYL1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.39■■□□□ 1.02
Scn7aB1AYL1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn7aB1AYL1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Gm25911-201ENSMUST00000157621 56 ntBASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Gm27628-201ENSMUST00000184911 107 ntBASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn7aB1AYL1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.37■■□□□ 1.01
Scn7aB1AYL1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms