Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col6a5A6H584 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col6a5A6H584 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col6a5A6H584 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.52□□□□□ -0.4
Col6a5A6H584 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col6a5A6H584 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 Gm45747-201ENSMUST00000212203 999 ntBASIC12.52□□□□□ -0.4
Col6a5A6H584 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a5A6H584 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a5A6H584 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a5A6H584 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.52□□□□□ -0.41
Col6a5A6H584 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a5A6H584 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a5A6H584 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.52□□□□□ -0.41
Col6a5A6H584 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.52□□□□□ -0.41
Col6a5A6H584 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a5A6H584 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a5A6H584 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Gm27306-201ENSMUST00000183970 107 ntBASIC12.51□□□□□ -0.41
Col6a5A6H584 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a5A6H584 Mir6990-201ENSMUST00000183724 91 ntBASIC12.51□□□□□ -0.41
Col6a5A6H584 Gm27646-201ENSMUST00000183989 110 ntBASIC12.51□□□□□ -0.41
Col6a5A6H584 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.51□□□□□ -0.41
Col6a5A6H584 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.51□□□□□ -0.41
Col6a5A6H584 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col6a5A6H584 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.5□□□□□ -0.41
Col6a5A6H584 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.5□□□□□ -0.41
Col6a5A6H584 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.5□□□□□ -0.41
Col6a5A6H584 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a5A6H584 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a5A6H584 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm11745-201ENSMUST00000121669 448 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm8655-201ENSMUST00000221159 852 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms