Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.98□□□□□ -0.17
Col6a4A2AX52 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.98□□□□□ -0.17
Col6a4A2AX52 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.98□□□□□ -0.17
Col6a4A2AX52 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.98□□□□□ -0.17
Col6a4A2AX52 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm7063-201ENSMUST00000186840 981 ntBASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a4A2AX52 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a4A2AX52 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Col6a4A2AX52 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Gm2213-201ENSMUST00000197485 688 ntBASIC13.96□□□□□ -0.18
Col6a4A2AX52 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.96□□□□□ -0.18
Col6a4A2AX52 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.96□□□□□ -0.18
Col6a4A2AX52 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a4A2AX52 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms