Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm11249-201ENSMUST00000117071 859 ntBASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm18666-201ENSMUST00000190039 958 ntBASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-5A0A140T8M6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm27275-201ENSMUST00000184318 272 ntBASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-5A0A140T8M6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm42545-201ENSMUST00000202755 922 ntBASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms