Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc194A0A140LIT1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Gm8520-201ENSMUST00000186517 868 ntBASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc194A0A140LIT1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc194A0A140LIT1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc194A0A140LIT1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms