Protein–RNA interactions for Protein: A0A0U1RPT6

4930433I11Rik, RIKEN cDNA 4930433I11 gene, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930433I11RikA0A0U1RPT6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Gm12441-201ENSMUST00000121806 588 ntBASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930433I11RikA0A0U1RPT6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gm20049-201ENSMUST00000219950 730 ntBASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.76□□□□□ -0.05
4930433I11RikA0A0U1RPT6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms