Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Ank2-226ENSMUST00000189368 339 ntBASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn2aA0A0J9YTW6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn2aA0A0J9YTW6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm17808-201ENSMUST00000200859 894 ntBASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn2aA0A0J9YTW6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms