Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm14281-201ENSMUST00000121700 1294 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm44443-201ENSMUST00000204396 5633 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Asic1-205ENSMUST00000228185 1818 ntBASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-27A0A0G2JF28 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-27A0A0G2JF28 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms