Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm27463-201ENSMUST00000183569 57 ntBASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm21814-202ENSMUST00000203277 873 ntBASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm37055-201ENSMUST00000191866 133 ntBASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.1□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm30025-201ENSMUST00000218555 728 ntBASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms