Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm27389-201ENSMUST00000183622 195 ntBASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Mir1668-201ENSMUST00000184114 107 ntBASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm18101-201ENSMUST00000215769 548 ntBASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv30A0A0B4J1P1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm13836-201ENSMUST00000121159 501 ntBASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv30A0A0B4J1P1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv30A0A0B4J1P1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv30A0A0B4J1P1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms