Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Rab3c-203ENSMUST00000224180 967 ntBASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav11A0A0B4J1J9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Gm10138-203ENSMUST00000206952 366 ntBASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav11A0A0B4J1J9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav11A0A0B4J1J9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.45□□□□□ -0.58
Trav11A0A0B4J1J9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms