Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm11927-201ENSMUST00000118472 759 ntBASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm7291-201ENSMUST00000199147 382 ntBASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv3A0A0A6YYE2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Prob1-201ENSMUST00000097619 3021 ntBASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms