Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mzt1-203ENSMUST00000227948 952 ntBASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-42A0A0A6YY38 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm5864-201ENSMUST00000202263 970 ntBASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-42A0A0A6YY38 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm12644-201ENSMUST00000119935 606 ntBASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-42A0A0A6YY38 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm44454-201ENSMUST00000198541 138 ntBASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm44771-201ENSMUST00000206975 626 ntBASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-42A0A0A6YY38 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm13884-201ENSMUST00000118103 829 ntBASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.3■□□□□ 0.04
Ighv1-42A0A0A6YY38 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms