Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv23A0A0A6YWQ1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv23A0A0A6YWQ1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm13158-201ENSMUST00000122007 736 ntBASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm10138-203ENSMUST00000206952 366 ntBASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv23A0A0A6YWQ1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms