Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm30025-201ENSMUST00000218555 728 ntBASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-7A0A075B6B0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm13401-201ENSMUST00000117074 291 ntBASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm11643-201ENSMUST00000119578 864 ntBASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Odf3b-204ENSMUST00000227834 930 ntBASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms