Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.65□□□□□ -0.22
Trav18A0A075B656 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trav18A0A075B656 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav18A0A075B656 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Gm18958-201ENSMUST00000174258 762 ntBASIC13.64□□□□□ -0.23
Trav18A0A075B656 Gm38027-201ENSMUST00000192315 235 ntBASIC13.64□□□□□ -0.23
Trav18A0A075B656 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.64□□□□□ -0.23
Trav18A0A075B656 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav18A0A075B656 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav18A0A075B656 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Mir1199-201ENSMUST00000117015 119 ntBASIC13.62□□□□□ -0.23
Trav18A0A075B656 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms