Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Gm11421-201ENSMUST00000122124 294 ntBASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Sybu-209ENSMUST00000228639 4113 ntBASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Gm22325-201ENSMUST00000158904 308 ntBASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-4A0A075B654 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-4A0A075B654 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms