Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-4-dv10A0A075B651 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Trav4-4-dv10A0A075B651 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-4-dv10A0A075B651 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Gm37179-201ENSMUST00000194862 823 ntBASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-4-dv10A0A075B651 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-4-dv10A0A075B651 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-4-dv10A0A075B651 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms