Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-7-dv9A0A075B639 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-7-dv9A0A075B639 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm13474-201ENSMUST00000122466 815 ntBASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-7-dv9A0A075B639 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm5417-201ENSMUST00000079706 384 ntBASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-7-dv9A0A075B639 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm16061-201ENSMUST00000122167 857 ntBASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm2274-201ENSMUST00000184539 609 ntBASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Gm30025-201ENSMUST00000218555 728 ntBASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-7-dv9A0A075B639 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-7-dv9A0A075B639 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms