Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Gm10138-203ENSMUST00000206952 366 ntBASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav16nA0A075B634 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav16nA0A075B634 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Gm26524-201ENSMUST00000192339 390 ntBASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Rab3c-203ENSMUST00000224180 967 ntBASIC12.61□□□□□ -0.39
Trav16nA0A075B634 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16nA0A075B634 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16nA0A075B634 Gm15375-201ENSMUST00000119510 849 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms