Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44357-201ENSMUST00000195897 142 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm19658-201ENSMUST00000196231 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44367-201ENSMUST00000196836 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44350-201ENSMUST00000197197 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44390-201ENSMUST00000197533 144 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44313-201ENSMUST00000198018 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44486-201ENSMUST00000198508 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44314-201ENSMUST00000199263 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44394-201ENSMUST00000199558 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44484-201ENSMUST00000199873 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44466-201ENSMUST00000200264 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm44359-201ENSMUST00000200671 138 ntBASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav8n-2A0A075B633 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8n-2A0A075B633 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8n-2A0A075B633 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Gm8000-201ENSMUST00000188378 592 ntBASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Gm2213-201ENSMUST00000197485 688 ntBASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8n-2A0A075B633 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms