Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Mir1668-201ENSMUST00000184114 107 ntBASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.22□□□□□ -0.45
Trav13d-1A0A075B606 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm25016-201ENSMUST00000158399 131 ntBASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm6345-202ENSMUST00000180900 204 ntBASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm21559-201ENSMUST00000220638 855 ntBASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Gm8587-201ENSMUST00000076538 843 ntBASIC12.21□□□□□ -0.45
Trav13d-1A0A075B606 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-1A0A075B606 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms