Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Mir1199-201ENSMUST00000117015 119 ntBASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-1A0A075B601 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Gm7638-201ENSMUST00000121348 967 ntBASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Gm13168-201ENSMUST00000121771 632 ntBASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Gm9731-201ENSMUST00000209480 747 ntBASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-1A0A075B601 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Gm20760-201ENSMUST00000179197 648 ntBASIC13□□□□□ -0.33
Trav9-1A0A075B601 Gm27000-201ENSMUST00000182943 842 ntBASIC13□□□□□ -0.33
Trav9-1A0A075B601 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-1A0A075B601 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Gm38027-201ENSMUST00000192315 235 ntBASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-1A0A075B601 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms