Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Gm5417-201ENSMUST00000079706 384 ntBASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav1A0A075B5Z4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav1A0A075B5Z4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav1A0A075B5Z4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Gm16061-201ENSMUST00000122167 857 ntBASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Gm30025-201ENSMUST00000218555 728 ntBASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav1A0A075B5Z4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms