Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.88□□□□□ -1.95
RPL39P62891 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 PSMD10P3-201ENST00000437000 448 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 AL512326.1-201ENST00000443050 721 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 RPL36AP15-201ENST00000444514 266 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC133473.1-201ENST00000455173 299 ntBASIC2.88□□□□□ -1.95
RPL39P62891 RPL36AP13-201ENST00000457490 317 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC105918.1-201ENST00000474399 838 ntBASIC2.88□□□□□ -1.95
RPL39P62891 CREM-230ENST00000474931 626 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 AF213884.1-201ENST00000488102 463 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC146944.2-203ENST00000502493 354 ntBASIC2.88□□□□□ -1.95
RPL39P62891 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC2.88□□□□□ -1.95
RPL39P62891 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AL592156.1-201ENST00000508758 304 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC026726.1-201ENST00000512859 601 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC139495.1-202ENST00000513164 354 ntBASIC2.88□□□□□ -1.95
RPL39P62891 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC2.88□□□□□ -1.95
RPL39P62891 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC2.88□□□□□ -1.95
RPL39P62891 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AC015911.5-201ENST00000587076 451 ntBASIC2.88□□□□□ -1.95
RPL39P62891 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AC133552.5-201ENST00000604266 540 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AC113403.1-201ENST00000604910 193 ntBASIC2.88□□□□□ -1.95
RPL39P62891 AL591424.2-201ENST00000617023 128 ntBASIC2.88□□□□□ -1.95
RPL39P62891 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC2.88□□□□□ -1.95
RPL39P62891 CGA-206ENST00000630630 832 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AC140479.6-201ENST00000633535 357 ntBASIC2.88□□□□□ -1.95
RPL39P62891 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.88□□□□□ -1.95
RPL39P62891 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RPL39P62891 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.88□□□□□ -1.95
RPL39P62891 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
RPL39P62891 ACTR3BP2-202ENST00000623630 1338 ntBASIC2.88□□□□□ -1.95
RPL39P62891 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.88□□□□□ -1.95
RPL39P62891 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 OR52B1P-201ENST00000316506 909 ntBASIC2.87□□□□□ -1.95
RPL39P62891 RNU6-249P-201ENST00000363016 102 ntBASIC2.87□□□□□ -1.95
RPL39P62891 SNORD35B-201ENST00000363660 87 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 NPM1P34-201ENST00000428821 893 ntBASIC2.87□□□□□ -1.95
RPL39P62891 TEX41-205ENST00000431734 529 ntTSL 4 BASIC2.87□□□□□ -1.95
RPL39P62891 RPL23AP46-201ENST00000438548 490 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AL450263.2-201ENST00000439400 589 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 RPS3AP53-201ENST00000454716 778 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC109327.1-201ENST00000471666 403 ntBASIC2.87□□□□□ -1.95
RPL39P62891 STRADBP1-201ENST00000478954 1281 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.87□□□□□ -1.95
RPL39P62891 BTF3L4P4-201ENST00000506381 449 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.87□□□□□ -1.95
RPL39P62891 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.87□□□□□ -1.95
RPL39P62891 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RPL39P62891 AC005798.1-201ENST00000513715 387 ntBASIC2.87□□□□□ -1.95
RPL39P62891 RNA5SP73-201ENST00000516744 108 ntBASIC2.87□□□□□ -1.95
RPL39P62891 RNU7-143P-201ENST00000516781 65 ntBASIC2.87□□□□□ -1.95
RPL39P62891 IGLVIV-65-201ENST00000517313 360 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 IGLV2-28-201ENST00000520681 304 ntBASIC2.87□□□□□ -1.95
RPL39P62891 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.87□□□□□ -1.95
RPL39P62891 AC012417.1-201ENST00000582307 1039 ntBASIC2.87□□□□□ -1.95
RPL39P62891 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 AC008782.1-201ENST00000603386 430 ntBASIC2.87□□□□□ -1.95
RPL39P62891 QTRT1P1-201ENST00000604344 1078 ntBASIC2.87□□□□□ -1.95
RPL39P62891 MIR6826-201ENST00000617808 98 ntBASIC2.87□□□□□ -1.95
RPL39P62891 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RPL39P62891 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.87□□□□□ -1.95
RPL39P62891 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.87□□□□□ -1.95
RPL39P62891 ERCC6-202ENST00000374127 1782 ntBASIC2.87□□□□□ -1.95
RPL39P62891 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RPL39P62891 RAD17P1-201ENST00000418130 2042 ntBASIC2.86□□□□□ -1.95
RPL39P62891 IPO8P1-201ENST00000455509 3109 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.86□□□□□ -1.95
RPL39P62891 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms